LOCUS P8FWB.TXT 7917 BP DS-DNA CIRCULAR SYN 17-MAY-2003
DEFINITION -
ACCESSION
-
KEYWORDS -
SOURCE -
FEATURES
Location/Qualifiers
misc_feature
complement(>29..2016)
/note="2kb EcoR1-Bgl frag with SAR in it"
mutation 1407..1407
/note="A in standard chrom 9 map, G in mine and M83137"
misc_feature
complement(>2062..2070)
/note="SV40 minor late 19S RNA"
promoter <2062..>2405
/note="SV40 promoter (ĘSELP)"
enhancer 2084..2226
/note="SV40 enhancer elements"
misc_feature
2231..2294
/note="SV40 21bp repeats"
rep_origin
2251..>2405
/note="SV40 Ori"
mRNA
2300..2306
/note="late-early transcription startpoints"
mutation 2320..2320
/note="G->A kills SELP ATG"
mRNA
2340..2346
/note="early-early
transcription start points"
misc_feature
2405..2405
/note="end homology to SV40"
promoter 2440..2494
/note="EM7 promoter"
CDS
2514..2936
/note="Blasticidin R"
polyA_signal
2966..>3187
/note="SV40 Late PolyA"
enhancer <3278..3475
/note="EF-1alpha promoter core domain"
promoter <3278..>4456
/note="EF1a promoter and UTR"
misc_difference 3278..>3469
/note="rhesus-derived"
exon
3476..3508
/note="EF-1a exon 1"
intron 3509..4448
/note="EF-1a intron A"
exon
4448..4456
/note="EF-1a exon 2 leader"
CDS
4573..5292
/note="EGFP"
mRNA
5376..>5964
/note="WPRE"
polyA_signal
6000..6668
/note="hEF1a
polyA signal"
rep_origin
6669..7402
/note="MB1 Ori"
promoter 7403..7489
/note="EM7 promoter"
promoter 7423..7469
/note="EM7 promoter"
CDS
7490..7864
/note="Zeo"
terminator
7865..7917
/note="terminator (rpmB/G)"
BASE COUNT 2081 A 1815 C 1951 G 2070 T 0 OTHER
ORIGIN -
1 CCCTGCATCA AGCTTGGTAC
CGAGCTCGGA TCTAAATAAA CTTATAAATT GTGAGAGAAA
61 TTAATGAATG TCTAAGTTAA
TGCAGAAACG GAGAGACATA CTATATTCAT GAACTAAAAG
121 ACTTAATATT GTGAAGGTAT ACTTTCTTTC
CACATAAATT TGTAGTCAAT ATGTTCACCC
181 CAAAAAAGCT GTTTGTTAAC TTGCCAACCT
CATTCTAAAA TGTATATAGA AGCCCAAAAG
241 ACAATAACAA AAATATTCTT GTAGAACAAA
ATGGGAAAGA ATGTTCCACT AAATATCAAG
301 ATTTAGAGCA AAGCATGAGA TGTGTGGGGA
TAGACAGTGA GGCTGATAAA ATAGAGTAGA
361 GCTCAGAAAC AGACCCATTG ATATATGTAA
GTGACCTATG AAAAAAATAT GGCATTTTAC
421 AATGGGAAAA TGATGATCTT TTTCTTTTTT
AGAAAAACAG GGAAATATAT TTATATGTAA
481 AAAATAAAAG GGAACCCATA TGTCATACCA
TACACACAAA AAAATTCCAG TGAATTATAA
541 GTCTAAATGG AGAAGGCAAA ACTTTAAATC
TTTTAGAAAA TAATATAGAA GCATGCCATC
601 ATGACTTCAG TGTAGAGAAA AATTTCTTAT
GACTCAAAGT CCTAACCACA AAGAAAAGAT
661 TGTTAATTAG ATTGCATGAA TATTAAGACT
TATTTTTAAA ATTAAAAAAC CATTAAGAAA
721 AGTCAGGCCA TAGAATGACA GAAAATATTT
GCAACACCCC AGTAAAGAGA ATTGTAATAT
781 GCAGATTATA AAAAGAAGTC TTACAAATCA
GTAAAAAATA AAACTAGACA AAAATTTGAA
841 CAGATGAAAG AGAAACTCTA AATAATCATT
ACACATGAGA AACTCAATCT CAGAAATCAG
901 AGAACTATCA TTGCATATAC ACTAAATTAG
AGAAATATTA AAAGGCTAAG TAACATCTGT
961 GGCAATATTG ATGGTATATA ACCTTGATAT
GATGTGATGA GAACAGTACT TTACCCCATG
1021 GGCTTCCTCC CCAAACCCTT ACCCCAGTAT AAATCATGAC AAATATACTT TAAAAACCAT
1081 TACCCTATAT CTAACCAGTA CTCCTCAAAA CTGTCAAGGT CATCAAAAAT AAGAAAAGTC
1141 TGAGGAACTG TCAAAACTAA GAGGAACCCA AGGAGACATG AGAATTATAT GTAATGTGGC
1201 ATTCTGAATG AGATCCCAGA ACAGAAAAAG AACAGTAGCT AAAAAACTAA TGAAATATAA
1261 ATAAAGTTTG AACTTTAGTT TTTTTTAAAA AAGAGTAGCA TTAACACGGC AAAGCCATTT
1321 TCATATTTTT CTTGAACATT AAGTACAAGT CTATAATTAA AAATTTTTTA AATGTAGTCT
1381 GGAACATTGC CAGAAACAGA AGTACAGCAG CTATCTGTGC TGTCGCCTAA CTATCCATAG
1441 CTGATTGGTC TAAAATGAGA TACATCAACG CTCCTCCATG TTTTTTGTTT TCTTTTTAAA
1501 TGAAAAACTT TATTTTTTAA GAGGAGTTTC AGGTTCATAG CAAAATTGAG AGGAAGGTAC
1561 ATTCAAGCTG AGGAAGTTTT CCTCTATTCC TAGTTTACTG AGAGATTGCA TCATGAATGG
1621 GTGTTAAATT TTGTCAAATG CTTTTTCTGT GTCTATCAAT ATGACCATGT GATTTTCTTC
1681 TTTAACCTGT TGATGGGACA AATTACGTTA ATTGATTTTC AAACGTTGAA CCACCCTTAC
1741 ATATCTGGAA TAAATTCTAC TTGGTTGTGG TGTATATTTT TTGATACATT CTTGGATTCT
1801 TTTTGCTAAT ATTTTGTTGA AAATGTTTGT ATCTTTGTTC ATGAGAGATA TTGGTCTGTT
1861 GTTTTCTTTT CTTGTAATGT CATTTTCTAG TTCCGGTATT AAGGTAATGC TGGCCTAGTT
1921 GAATGATTTA GGAAGTATTC CCTCTGCTTC TGTCTTCTGA AAGAGATTGT AGAAAGTTGA
1981 TACAATTTTT TTTTCTTTAA ATATTTGATA GAATTCTGCA GGGCCTGAAA TAACCTCTGA
2041 AAGAGGAACT TGGTTAGGTA CCTGTGGAAT GTGTGTCAGT TAGGGTGTGG AAAGTCCCCA
2101 GGCTCCCCAG CAGGCAGAAG TATGCAAAGC ATGCATCTCA ATTAGTCAGC AACCAGGTGT
2161 GGAAAGTCCC CAGGCTCCCC AGCAGGCAGA AGTATGCAAA GCATGCATCT CAATTAGTCA
2221 GCAACCATAG TCCCGCCCCT AACTCCGCCC ATCCCGCCCC TAACTCCGCC CAGTTCCGCC
2281 CATTCTCCGC CCCATGGCTG ACTAATTTTT TTTATTTATA CAGAGGCCGA GGCCGCCTCG
2341 GCCTCTGAGC TATTCCAGAA GTAGTGAGGA GGCTTTTTTG GAGGCCTAGG CTTTTGCAAA
2401 AAGCTCCCGG GAGCTTGTAT ATCCATTTTC GGATCTGATC AGCACGTGTT GACAATTAAT
2461 CATCGGCATA GTATATCGGC ATAGTATAAT ACGACAAGGT GAGGAACTAA ATCATGAAGA
2521 CCTTCAACAT CTCTCAGCAG GATCTGGAGC TGGTGGAGGT CGCCACTGAG AAGATCACCA
2581 TGCTCTATGA GGACAACAAG CACCATGTCG GGGCGGCCAT CAGGACCAAG ACTGGGGAGA
2641 TCATCTCTGC TGTCCACATT GAGGCCTACA TTGGCAGGGT CACTGTCTGT GCTGAAGCCA
2701 TTGCCATTGG GTCTGCTGTG AGCAACGGGC AGAAGGACTT TGACACCATT GTGGCTGTCA
2761 GGCACCCCTA CTCTGATGAG GTGGACAGAT CCATCAGGGT GGTCAGCCCC TGTGGCATGT
2821 GCAGAGAGCT CATCTCTGAC TATGCTCCTG ACTGCTTTGT GCTCATTGAG ATGAATGGCA
2881 AGCTGGTCAA AACCACCATT GAGGAACTCA TCCCCCTCAA GTACACCAGG AACTAAACCT
2941 GAATTCGCTA GAGGGCCGCT TCGAGCAGAC ATGATAAGAT ACATTGATGA GTTTGGACAA
3001 ACCACAACTA GAATGCAGTG AAAAAAATGC TTTATTTGTG AAATTTGTGA TGCTATTGCT
3061 TTATTTGTAA CCATTATAAG CTGCAATAAA CAAGTTAACA ACAACAATTG CATTCATTTT
3121 ATGTTTCAGG TTCAGGGGGA GGTGTGGGAG GTTTTTTAAA GCAAGTAAAA CCTCTACAAA
3181 TGTGGTAAAA TCGATAAGGA TCCGGGCTGG CGTAATAGCG AAGAGGCCCG CACCGATCGC
3241 CCTTCCCAAC AGTTGCGGTG GAGAAGAGCA TGCGTGAGGC TCCGGTGCCC GTCAGTGGGC
3301 AGAGCGCACA TCGCCCACAG TCCCCGAGAA GTTGGGGGGA GGGGTCGGCA ATTGAACCGG
3361 TGCCTAGAGA AGGTGGCGCG GGGTAAACTG GGAAAGTGAT GTCGTGTACT GGCTCCGCCC
3421 TTTTCCCGAG GGTGGGGGAG AACCGTATAT AAGTGCAGTA GTCGCTGTGA ACGTTCTTTT
3481 TCGCAACGGG TTTGCCGCCA GAACACAGGT AAGTGCCGTG TGTGGTTCCC GCGGGCCTGG
3541 CCTCTTTACG GGTTATGGCC CTTGCGTGCC TTGAATTACT TCCACCTGGC TGCAGTACGT
3601 GATTCTTGAT CCCGAGCTTC GGGTTGGAAG TGGGTGGGAG AGTTCGAGGC CTTGCGCTTA
3661 AGGAGCCCCT TCGCCTCGTG CTTGAGTTGA GGCCTGGCCT GGGCGCTGGG GCCGCCGCGT
3721 GCGAATCTGG TGGCACCTTC GCGCCTGTCT CGCTGCTTTC GATAAGTCTC TAGCCATTTA
3781 AAATTTTTGA TGACCTGCTG CGACGCTTTT TTTCTGGCAA GATAGTCTTG TAAATGCGGG
3841 CCAAGATCTG CACACTGGTA TTTCGGTTTT TGGGGCCGCG GGCGGCGACG GGGCCCGTGC
3901 GTCCCAGCGC ACATGTTCGG CGAGGCGGGG CCTGCGAGCG CGGCCACCGA GAATCGGACG
3961 GGGGTAGTCT CAAGCTGGCC GGCCTGCTCT GGTGCCTGGC CTCGCGCCGC CGTGTATCGC
4021 CCCGCCCTGG GCGGCAAGGC TGGCCCGGTC GGCACCAGTT GCGTGAGCGG AAAGATGGCC
4081 GCTTCCCGGC CCTGCTGCAG GGAGCTCAAA ATGGAGGACG CGGCGCTCGG GAGAGCGGGC
4141 GGGTGAGTCA CCCACACAAA GGAAAAGGGC CTTTCCGTCC TCAGCCGTCG CTTCATGTGA
4201 CTCCACGGAG TACCGGGCGC CGTCCAGGCA CCTCGATTAG TTCTCGAGCT TTTGGAGTAC
4261 GTCGTCTTTA GGTTGGGGGG AGGGGTTTTA TGCGATGGAG TTTCCCCACA CTGAGTGGGT
4321 GGAGACTGAA GTTAGGCCAG CTTGGCACTT GATGTAATTC TCCTTGGAAT TTGCCCTTTT
4381 TGAGTTTGGA TCTTGGTTCA TTCTCAAGCC TCAGACAGTG GTTCAAAGTT TTTTTCTTCC
4441 ATTTCAGGTG TCGTGAGGAA TTCTCTAGAG ATCCCTCGAC CTCGAGATCC ATTGTGCTGG
4501 ATCTGCGATC TAAGTAAGCT TCGAATTCTG CAGTCGACGG TACCGCGGGC CCGGGATCCA
4561 CCGGTCGCCA CCATGGTGAG CAAGGGCGAG GAGCTGTTCA CCGGGGTGGT GCCCATCCTG
4621 GTCGAGCTGG ACGGCGACGT AAACGGCCAC AAGTTCAGCG TGTCCGGCGA GGGCGAGGGC
4681 GATGCCACCT ACGGCAAGCT GACCCTGAAG TTCATCTGCA CCACCGGCAA GCTGCCCGTG
4741 CCCTGGCCCA CCCTCGTGAC CACCCTGACC TACGGCGTGC AGTGCTTCAG CCGCTACCCC
4801 GACCACATGA AGCAGCACGA CTTCTTCAAG TCCGCCATGC CCGAAGGCTA CGTCCAGGAG
4861 CGCACCATCT TCTTCAAGGA CGACGGCAAC TACAAGACCC GCGCCGAGGT GAAGTTCGAG
4921 GGCGACACCC TGGTGAACCG CATCGAGCTG AAGGGCATCG ACTTCAAGGA GGACGGCAAC
4981 ATCCTGGGGC ACAAGCTGGA GTACAACTAC AACAGCCACA ACGTCTATAT CATGGCCGAC
5041 AAGCAGAAGA ACGGCATCAA GGTGAACTTC AAGATCCGCC ACAACATCGA GGACGGCAGC
5101 GTGCAGCTCG CCGACCACTA CCAGCAGAAC ACCCCCATCG GCGACGGCCC CGTGCTGCTG
5161 CCCGACAACC ACTACCTGAG CACCCAGTCC GCCCTGAGCA AAGACCCCAA CGAGAAGCGC
5221 GATCACATGG TCCTGCTGGA GTTCGTGACC GCCGCCGGGA TCACTCTCGG CATGGACGAG
5281 CTGTACAAGT AAAGCGGCCG CTCCACCGCG GTGGCGGCCG CTCTAGAACT AGTGGATCCC
5341 CCGGGCTGCA GGAATTCGAT ATCAAGCTTA TCGATAATCA ACCTCTGGAT TACAAAATTT
5401 GTGAAAGATT GACTGGTATT CTTAACTATG TTGCTCCTTT TACGCTATGT GGATACGCTG
5461 CTTTAATGCC TTTGTATCAT GCTATTGCTT CCCGTATGGC TTTCATTTTC TCCTCCTTGT
5521 ATAAATCCTG GTTGCTGTCT CTTTATGAGG AGTTGTGGCC CGTTGTCAGG CAACGTGGCG
5581 TGGTGTGCAC TGTGTTTGCT GACGCAACCC CCACTGGTTG GGGCATTGCC ACCACCTGTC
5641 AGCTCCTTTC CGGGACTTTC GCTTTCCCCC TCCCTATTGC CACGGCGGAA CTCATCGCCG
5701 CCTGCCTTGC CCGCTGCTGG ACAGGGGCTC GGCTGTTGGG CACTGACAAT TCCGTGGTGT
5761 TGTCGGGGAA ATCATCGTCC TTTCCTTGGC TGCTCGCCTG TGTTGCCACC TGGATTCTGC
5821 GCGGGACGTC CTTCTGCTAC GTCCCTTCGG CCCTCAATCC AGCGGACCTT CCTTCCCGCG
5881 GCCTGCTGCC GGCTCTGCGG CCTCTTCCGC GTCTTCGCCT TCGCCCTCAG ACGAGTCGGA
5941 TCTCCCTTTG GGCCGCCTCC CCGCATCGAT ACCGTCGGCC CACTGCTCCC TAAACCTGAG
6001 CTAGCATTAT CCCTAATACC TGCCACCCCA CTCTTAATCA GTGGTGGAAG AACGGTCTCA
6061 GAACTGTTTG TTTCAATTGG CCATTTAAGT TTAGTAGTAA AAGACTGGTT AATGATAACA
6121 ATGCATCGTA AAACCTTCAG AAGGAAAGGA GAATGTTTTG TGGACCACTT TGGTTTTCTT
6181 TTTTGCGTGT GGCAGTTTTA AGTTATTAGT TTTTAAAATC AGTACTTTTT AATGGAAACA
6241 ACTTGACCAA AAATTTGTCA CAGAATTTTG AGACCCATTA AAAAAGTTAA ATGAGAAACC
6301 TGTGTGTTCC TTTGGTCAAC ACCGAGACAT TTAGGTGAAA GACATCTAAT TCTGGTTTTA
6361 CGAATCTGGA AACTTCTTGA AAATGTAATT CTTGAGTTAA CACTTCTGGG TGGAGAATAG
6421 GGTTGTTTTC CCCCCACATA ATTGGAAGGG GAAGGAATAT CATTTAAAGC TATGGGAGGG
6481 TTTCTTTGAT TACAACACTG
GAGAGAAATG CAGCATGTTG CTGATTGCCT GTCACTAAAA
6541 CAGGCCAAAA ACTGAGTCCT TGGGTTGCAT AGAAAGCTTC ATGTTGCTAA ACCAATGTTA
6601 AGTGAATCTT TGGAAACAAA ATGTTTCCAA ATTACTGGGA TGTGCATGTT GAAACGTGGG
6661 TTAATTAACT AGCCATGACC AAAATCCCTT AACGTGAGTT TTCGTTCCAC TGAGCGTCAG
6721 ACCCCGTAGA AAAGATCAAA GGATCTTCTT GAGATCCTTT TTTTCTGCGC GTAATCTGCT
6781 GCTTGCAAAC AAAAAAACCA CCGCTACCAG CGGTGGTTTG TTTGCCGGAT CAAGAGCTAC
6841 CAACTCTTTT TCCGAAGGTA ACTGGCTTCA GCAGAGCGCA GATACCAAAT ACTGTTCTTC
6901 TAGTGTAGCC GTAGTTAGGC CACCACTTCA AGAACTCTGT AGCACCGCCT ACATACCTCG
6961 CTCTGCTAAT CCTGTTACCA GTGGCTGCTG CCAGTGGCGA TAAGTCGTGT CTTACCGGGT
7021 TGGACTCAAG ACGATAGTTA CCGGATAAGG CGCAGCGGTC GGGCTGAACG GGGGGTTCGT
7081 GCACACAGCC CAGCTTGGAG CGAACGACCT ACACCGAACT GAGATACCTA CAGCGTGAGC
7141 TATGAGAAAG CGCCACGCTT CCCGAAGGGA GAAAGGCGGA CAGGTATCCG GTAAGCGGCA
7201 GGGTCGGAAC AGGAGAGCGC ACGAGGGAGC TTCCAGGGGG AAACGCCTGG TATCTTTATA
7261 GTCCTGTCGG GTTTCGCCAC CTCTGACTTG AGCGTCGATT TTTGTGATGC TCGTCAGGGG
7321 GGCGGAGCCT ATGGAAAAAC GCCAGCAACG CGGCCTTTTT ACGGTTCCTG GCCTTTTGCT
7381 GGCCTTTTGC TCACATGTTC TTAATTAAAT TTTTCAAAAG TAGTTGACAA TTAATCATCG
7441 GCATAGTATA TCGGCATAGT ATAATACGAC TCACTATAGG AGGGCCATCA TGGCCAAGTT
7501 GACCAGTGCT GTCCCAGTGC TCACAGCCAG GGATGTGGCT GGAGCTGTTG AGTTCTGGAC
7561 TGACAGGTTG GGGTTCTCCA GAGATTTTGT GGAGGATGAC TTTGCAGGTG TGGTCAGAGA
7621 TGATGTCACC CTGTTCATCT CAGCAGTCCA GGACCAGGTG GTGCCTGACA ACACCCTGGC
7681 TTGGGTGTGG GTGAGAGGAC TGGATGAGCT GTATGCTGAG TGGAGTGAGG TGGTCTCCAC
7741 CAACTTCAGG GATGCCAGTG GCCCTGCCAT GACAGAGATT GGAGAGCAGC CCTGGGGGAG
7801 AGAGTTTGCC CTGAGAGACC CAGCAGGCAA CTGTGTGCAC TTTGTGGCAG AGGAGCAGGA
7861 CTGAGGATAA GAATTGTAAC AAAAAACCCC GCCCCGGCGG GGTTTTTTGT TAATTAA
//