From: Ji, Xinhua (NIH/NCI) [E]
Sent: Friday, October 13, 2023 1:51 PM
To: Ji, Xinhua (NIH/NCI) [E]
Subject: Newsletter 500 (October 16, 2023) NIH X-ray Diffraction SIG
SEPTEMBER 2023 PUBLICATIONS BY MEMBERS OF THE
GROUP
1: Suddala KC, Yoo J, Fan L,
Zuo X, Wang YX,
Chung HS, Zhang J.
Direct observation of
tRNA-chaperoned folding of a dynamic mRNA ensemble.
Nat Commun. 2023 Sep
6;14(1):5438. doi: 10.1038/s41467-023-41155-3. PMID: 37673863; PMCID:
PMC10482949.
2: Ou L, Chen SJ, Teng IT,
Yang L, Zhang B, Zhou T, Biju A, Cheng C, Kong WP, Morano NC, Stancofski ED,
Todd JP, Tsybovsky Y, Wang S, Zheng CY, Mascola JR, Shapiro L, Woodward RA,
Buchholz UJ, Kwong
PD.
Structure-based design of a
single-chain triple-disulfide-stabilized fusion-glycoprotein trimer that
elicits high-titer neutralizing responses against human metapneumovirus.
PLoS Pathog. 2023 Sep
22;19(9):e1011584. doi: 10.1371/journal.ppat.1011584. PMID: 37738240; PMCID:
PMC10516418.
3: Jiang J, Boughter CT,
Ahmad J, Natarajan K, Boyd LF, Meier-Schellersheim M, Margulies DH.
SARS-CoV-2 antibodies
recognize 23 distinct epitopic sites on the receptor binding domain.
Commun Biol. 2023 Sep
19;6(1):953. doi: 10.1038/s42003-023-05332-w. PMID: 37726484; PMCID:
PMC10509263.
4: Sim MJW, Brennan P, Wahl
KL, Lu J, Rajagopalan S, Sun PD,
Long EO.
Innate receptors with high
specificity for HLA class I-peptide complexes.
Sci Immunol. 2023 Sep
8;8(87):eadh1781. doi: 10.1126/sciimmunol.adh1781. Epub 2023 Sep 8. PMID:
37683038.
5: Okuno Y, Clore
GM.
Extending the Experimentally
Accessible Range of Spin Dipole-Dipole Spectral Densities for Protein-Cosolute
Interactions by Temperature-Dependent Solvent Paramagnetic Relaxation
Enhancement Measurements.
J Phys Chem B. 2023 Sep
21;127(37):7887-7898. doi: 10.1021/acs.jpcb.3c05301. Epub 2023 Sep 8. PMID:
37681752.
6: Warden MS, DeRose EF,
Tamayo JV, Mueller GA, Gavis ER, Hall
TMT.
The translational repressor
Glorund uses interchangeable RNA recognition domains to recognize Drosophila
nanos.
Nucleic Acids Res. 2023 Sep
8;51(16):8836-8849. doi: 10.1093/nar/gkad586. PMID: 37427795; PMCID:
PMC10484662.
7: Hui GK, Gao X, Gor J, Lu
J, Sun PD, Perkins SJ.
The solution structure of the
unbound IgG Fc receptor CD64 resembles its crystal structure: Implications for
function.
PLoS One. 2023 Sep
21;18(9):e0288351. doi: 10.1371/journal.pone.0288351. PMID: 37733670; PMCID:
PMC10513344.
8: Liu Y, Esser L, Bai H, Fu
B, Xia D, Zhou Y,
Hong S, Yang S, Xiao Y, Qin Z.
Synthesis and
Antiphytopathogenic Activity of Novel Oxazolidine-2,4-diones Bearing
Phenoxypyridine Moiety.
J Agric Food Chem. 2023 Sep
20. doi: 10.1021/acs.jafc.3c03464. Epub ahead of print. PMID: 37728976.
9: Raina R, Banerjee
A.
Architects of the membrane:
structures of eukaryotic choline phosphotransferase 1 and choline/ethanolamine
phosphotransferase 1.
Nat Struct Mol Biol. 2023 Sep;30(9):1247-1250.
doi: 10.1038/s41594-023-01073-w. PMID: 37696961.
10: Hori T, Yokobori K, Moore
R, Negishi
M, Sueyoshi T.
CAR requires Gadd45¦Â to
promote phenobarbital-induced mouse liver tumors in early stage.
Front Oncol. 2023 Sep
7;13:1217847. doi: 10.3389/fonc.2023.1217847. PMID: 37746289; PMCID:
PMC10516603.
11: Puthenveetil R, Auger SA,
G¨®mez-Navarro N, Rana MS, Das R, Healy LB, Suazo KF, Shi ZD, Swenson RE,
Distefano MD, Banerjee
A.
Orthogonal Enzyme-Substrate
Design Strategy for Discovery of Human Protein Palmitoyltransferase Substrates.
J Am Chem Soc. 2023 Sep 29.
doi: 10.1021/jacs.3c04359. Epub ahead of print. PMID: 37774000.
METHODS ¨C Cryo-EM in
Structure-Based Drug Design
I.
Victorial et al. ¡°High-resolution cryo-electron microscopy of the human
CDK-activating kinase for structure-based drug design¡±
bioRxiv preprint
doi: https://doi.org/10.1101/2023.04.07.536029; this version posted April 12, 2023.
METHODS - Macromolecular
Crystallography
W.A.
Hendrickson, ¡°Facing the phase problem¡± PMID: 37668214
J.L. Smith,
¡°Commentary on ¡®Facing the phase problem¡¯ by Wayne Hendrickson¡± PMID: 37615300.
Xinhua Ji, Ph.D.
Senior Investigator
National Cancer Institute,
NIH
Phone: (301) 846-5035