Newsletter 510 (March 18, 2024) NIH X-ray Diffraction SIG
FEBRUARY 2024 PUBLICATIONS BY MEMBERS
OF THE GROUP
1: Lee
YS, Levdansky Y, Jung Y, Kim VN, Valkov E.
Deadenylation
kinetics of mixed poly(A) tails at single-nucleotide resolution.
Nat
Struct Mol Biol. 2024 Feb 19.
doi: 10.1038/s41594-023-01187-1. Epub
ahead of print. PMID: 38374449.
Trop Med
Infect Dis. 2024 Feb 1;9(2):39.
doi: 10.3390/tropicalmed9020039. PMID: 38393128; PMCID:
PMC10892539.
3: Rimkute I, Chaimongkol N, Woods
KD, Nagata BM, Darko S, Gudbole S, Henry AR, Sosnovtsev SV, Olia AS, Verardi R, Bok K, Todd JP, Woodward R, Kwong PD, Douek
DC, Alves DA, Green KY, Roederer M.
A
non-human primate model for human norovirus infection.
Nat Microbiol. 2024 Feb 6.
doi: 10.1038/s41564-023-01585-7. Epub
ahead of print. Erratum in: Nat Microbiol. 2024 Feb 15;: PMID: 38321182.
4: Mayer MP,
Blair L, Blatch GL, Borges TJ, Chadli
A, Chiosis G, de Thonel A, Dinkova-Kostova A, Ecroyd H, Edkins AL, Eguchi T, Fleshner M, Foley KP, Fragkostefanakis
S, Gestwicki J, Goloubinoff
P, Heritz JA, Heske CM, Hibshman JD, Joutsen J, Li W,
Lynes M, Mendillo ML, Mivechi N, Mokoena F, Okusha Y, Prahlad V, Repasky E, Sannino S, Scalia F, Shalgi R, Sistonen L, Sontag E,
van Oosten-Hawle P, Vihervaara
A, Wickramaratne A, Wang SXY, Zininga
T.
Stress
biology: Complexity and multifariousness in health and disease.
Cell
Stress Chaperones. 2024 Feb 3;29(1):143-157.
doi: 10.1016/j.cstres.2024.01.006. Epub
ahead of print. PMID: 38311120.
5:
Collins JC, Magaziner SJ, English M, Hassan B, Chen
X, Balanda N, Anderson M, Lam A, Fernandez-Pol S, Kwong
B, Greenberg PL, Terrier B, Likhite ME, Kosmider O, Wang Y, Samara
NL, Walters KJ, Beck DB, Werner A.
Shared
and distinct mechanisms of UBA1 inactivation across different diseases.
EMBO J.
2024 Feb 15.
doi: 10.1038/s44318-024-00046-z. Epub
ahead of print. PMID: 38360993.
6: Folco HD, Xiao H, Wheeler D, Feng H, Bai Y, Grewal SIS.
Nucleic
Acids Res. 2024 Feb 28;52(4):1688-1701.
doi: 10.1093/nar/gkad1182. PMID:
38084929; PMCID: PMC10899784.
7:
Gerard L, Duvivier L, Fourrez
M, Salazar P, Sprimont L, Xia
D, Ambudkar SV, Gottesman MM, Gillet JP.
Identification
of two novel heterodimeric ABC transporters in melanoma: ABCB5β/B6 and
ABCB5β/B9.
J Biol
Chem. 2024 Feb;300(2):105594.
doi: 10.1016/j.jbc.2023.105594. Epub
2023 Dec 23. PMID: 38145744; PMCID: PMC10828454.
8:
Collette AM, Hassan SA, Schmidt SI, Lara AJ, Yang W, Samara
NL.
Sci Adv.
2024 Mar;10(9):eadj8829.
doi: 10.1126/sciadv.adj8829. Epub 2024 Feb 28. PMID: 38416819; PMCID: PMC10901373.
9: Duan
H, Corrigan AR, Cheng C, Biju A, Gonelli CA, Olia AS, Teng IT, Xu K, O'Dell S, Narpala
S, Castro M, Serebryannyy L, Wang J, Parchment DK,
Sarfo EK, van Schooten J, Todd JP, Wang S, Harris DR,
Geng H, Jafari AJ; VRC Production Program; Woodward
RA, Doria-Rose NA, Foulds
KE, McDermott AB, van Gils MJ, Koup RA, Pierson TC, Kwong PD, Mascola
JR.
iScience. 2024 Jan 11;27(2):108877.
doi: 10.1016/j.isci.2024.108877. PMID: 38318357; PMCID:
PMC10839646.
10: Iwaï H, Beyer HM, Johansson JEM, Li M, Wlodawer A.
FEBS
Lett. 2024 Feb 13.
doi: 10.1002/1873-3468.14817. Epub
ahead of print. PMID: 38351630.
11: Rimkute I, Chaimongkol N, Woods
KD, Nagata BM, Darko S, Gudbole S, Henry AR, Sosnovtsev SV, Olia AS, Verardi R, Bok K, Todd JP, Woodward R, Kwong PD, Douek
DC, Alves DA, Green KY, Roederer M.
Publisher
Correction: A non-human primate model for human norovirus infection.
Nat Microbiol. 2024 Feb 15.
doi: 10.1038/s41564-024-01636-7. Epub
ahead of print. Erratum for: Nat Microbiol. 2024 Feb 6;: PMID: 38360987.
12:
Hayne CK, Butay KJU, Stewart ZD, Krahn
JM, Perera L, Williams JG, Petrovitch RM, Deterding LJ, Matera AG, Borgnia
MJ, Stanley RE.
Nat
Struct Mol Biol. 2024 Feb;31(2):390.
doi: 10.1038/s41594-024-01213-w. Erratum for: Nat Struct Mol
Biol. 2023 Jun;30(6):824-833. PMID: 38196035.
For timely listing, please
send a heads-up E-mail to the Editor
upon publication.
METHODS – Integrative
Structural Biology
M. Bochtler, “X-rays, electrons, and neutrons
as probes of atomic matter” PMID: 38412856.
METHODS – XFEL,
3D-printed liquid sheet jet technology
M. Trebbin, “Thinner
than a knife’s edge: 3D-printed liquid sheet jet technology for solution phase
XFEL experiments” PMID: 37910141.
METHODS – Cryo-EM,
in Rational Design of Hybrid Inhibitors
G.J. Kleywegt, “Community
recommendations on cryoEM data archiving and
validation” PMID: 38358351.
M. Kschonsak et al., “Cryo-EM
reveals an unprecedented binding site for Nav1.7 inhibitors enabling rational
design of potent hybrid inhibitors” PMID: 36975198.
READINGS & TUTORIALS – Macromolecular Crystallography
D.J.
Haas, “Fifty years on: why macromolecular cryocrystallography
has been so successful” IUCr Newsletter (2023) 31(3).
W.A.
Hendrickson, “Facing
the phase problem” PMID: 37668214.
DATABASES – Structural
Biology
AlphaFold DB, BioCyc, DisProt, ExPASy, HAD, HIC-Up, NDB, PDB, PDBe, PDB SARS-CoV-2 Resources, SARS-CoV-2 Related Structures, RaMP-DB, virusMED,
Xinhua
Ji, Ph.D.
Senior
Investigator
National
Cancer Institute, NIH
Phone:
(301) 846-5035