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Newsletter No. 481 |
January 2, 2023 |
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Happy New Year! |
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DECEMBER 2022 PUBLICATIONS BY MEMBERS OF THE GROUP
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METHODS - Suggestions? ARCHIVE: Introduction, Sample Preparation, Pre-crystallization, Crystallization, Post-crystallization, Derivatization, Cryoprotection, Diffraction, Symmetry, Structure Solution, Structure Refinement, Structure Analysis & Presentation, Other Biophysical Methods, Integrative Structure Determination. |
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DISCUSSIONS - The Protein Folding Problem Z. Lin et al., "Evolutionary-scale prediction of atomic level protein structure with a language model" B. I. M. Wicky et al., "Hallucinating symmetric protein assemblies" P. B. Moore et al., "The protein-folding problem: Not yet solved" K. A Dill et al., "The protein folding problem" The Protein Data Bank
Mariusz Jaskolski et al., "Group depositiions to the Protein Data Bank need adequate presentation and different archiving protocol" Stephen Burley, "Looking ahead to the next 50 years of the Protein Data Bank" ARCHIVE: Test-set-and-R-free, Twinning, Low Resolution Crystallography, PHASER, HKL2000, Parallel Expression, NCS, Missing Atoms, Trends in Crystallography, Absorption Correction, Data for Refinement and Publication, Validation, Table 1. |
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READINGS AND TUTORIALS - Career Overview of Prof Sir Tom Blundell Tom Blundell, "Structural Biology, Bioinformatics and Drug Discovery: Six Decades of Science & Its Applications" (2022) ARCHIVE: Integrative Structural Biology, 2005-2021 |
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LINKS - Suggestions? Databases: DisProt, ExPASy, HAD, HIC-Up, NDB, PDB, PDBe, Protein Geometry SARS-CoV-2 Related Structures, PDB SARS-CoV-2 Resources, AlphaFold DB, virusMED, BioCyc, RaMP-DB, Programs: CCP4, COOT, DSSR, HKL, PHENIX, PyMOL, SOLVE, XDS Servers: ACHESYM, Anisotropy, C6@C3, Dali, ESPript, Grade, PDBePISA, Phyre2, MolProbity, RestraintLib, Robetta (RoseTTAFold), |
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Copyright © NIH X-Ray Diffraction Group Maintained by Dr. Xinhua Ji | |||